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refactor: improve hierarchy separator usage in context

Lukasz Butkowski requested to merge sep into main

It was now agreed upon with the ChimeraTK team that mapfiles can use dots as hierarchy separators in all cases (modules, regfiles, arrays of memories). For VHDL code, an underscore is always used.

The code that creates strings for the template engine now always uses the filetype-specific hierarchy separator to connect individual sub-strings.

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