Update AnalysisInstructions.md

AnalysisInstructions.md

@@ -31,7 +31,7 @@ git checkout v5.7.0.-dev
 
 Use [./set_v500.sh](./set_v500.sh) script to set the correct paths (check script and make sure that those exist):
 ```
-source ./set_v500.sh
+source ./set_v500.sh TS
 ```
 
 Download dependency on SOFA (astrometry):
@@ -68,7 +68,7 @@ git checkout v500_nncleaning
 
 Running a small IRF production for lookup table / effective area generation. 
 
-Minor modification to running scripts:
+Minor modification to running scripts (otherwise you will start thousand of jobs over all simulation files on disk):
 
 1. Reduce phase space to be covered
 Add line 80/after CARE_June2020 in IRF.production.sh:
@@ -81,7 +81,7 @@ Add line 80/after CARE_June2020 in IRF.production.sh:
 ```
 2. Set all paths and analysis type
 
-Use NN for optimised next-neighbour cleaning, TS for default cleaning.
+Use `./set_v500.sh NN` for optimised next-neighbour cleaning and `./set_v500.sh TS` for default (TS) cleaning.
 
 This will:
 - select the correct runparameter file for `evndisp` (e.g., ACUTS="EVNDISP.reconstruction.runparameter.NN") 
@@ -89,36 +89,36 @@ This will:
 
 3. Evndisp analysis
 ```
-./IRF.production.sh CARE_June2020 EVNDISP V6_2012_2013a 61 0
+./IRF.production.sh CARE_June2020 EVNDISP V6_2012_2013a 62 0
 ```
 4. Lookup table stage
 ```
-./IRF.production.sh  CARE_June2020 MAKETABLES V6_2012_2013a 61 0
+./IRF.production.sh  CARE_June2020 MAKETABLES V6_2012_2013a 62 0
 ```
 5. Combine lookup tables
 ```
-./IRF.production.sh CARE_June2020 COMBINETABLES V6_2012_2013a 61 0
+./IRF.production.sh CARE_June2020 COMBINETABLES V6_2012_2013a 62 0
 ```
-Tables should be copied from `$VERITAS_USER_DATA_DIR/analysis/Results/v505/TS/Tables` into `$VERITAS_EVNDISP_AUX_DIR/Tables` (same for NN)
+Tables should be copied from `$VERITAS_USER_DATA_DIR/analysis/Results/v570/TS/Tables` into `$VERITAS_EVNDISP_AUX_DIR/Tables` (same for NN)
 
 6. Analyse lookup tables
 ```
-./IRF.production.sh CARE_June2020 ANALYSETABLES V6_2012_2013a 61 0
+./IRF.production.sh CARE_June2020 ANALYSETABLES V6_2012_2013a 62 0
 ```
 
 7. Effective areas
 ```
-./IRF.production.sh CARE_June2020 EFFECTIVEAREAS  V6_2012_2013a 61 0
+./IRF.production.sh CARE_June2020 EFFECTIVEAREAS  V6_2012_2013a 62 0
 ```
 
 8. Combine effective areas
 ```
-./IRF.production.sh CARE_June2020 COMBINEEFFECTIVEAREAS V6_2012_2013a 61 0
+./IRF.production.sh CARE_June2020 COMBINEEFFECTIVEAREAS V6_2012_2013a 62 0
 ```
 
-Effective area files should be copied from `$VERITAS_USER_DATA_DIR/analysis/Results/v505/TS/CARE_June2020/V6_2012_2013a_ATM61_gamma/EffectiveAreas` to `$VERITAS_EVNDISP_AUX_DIR/EffectiveAreas`
+Effective area files should be copied from `$VERITAS_USER_DATA_DIR/analysis/Results/v570/TS/CARE_June2020/V6_2012_2013a_ATM61_gamma/EffectiveAreas` to `$VERITAS_EVNDISP_AUX_DIR/EffectiveAreas` (same for NN)
 
-## Running a test analysis
+## Running a test data analysis
 
 The only difference between running the two analyses is in the usage of different run parameters for the evndisp step. 
 Note that for all following analysis, different lookup tables and IRFs are required.