Commits · 9fdd46abcc06256d0f29d74ccb45551210765cf1 · Oleksii Turkot / CrystFEL

22 Feb, 2012 40 commits
- Fussiness · 9fdd46ab
  Thomas White authored Jan 28, 2012 and Thomas White committed Feb 22, 2012
  
  9fdd46ab
- hdfsee: document --show-rings and --simple-rings options · b2a9f6fb
  Richard A. Kirian authored Jan 27, 2012 and Thomas White committed Feb 22, 2012
  
  b2a9f6fb
- hdfsee: added an option to overlay rings with user-defined radii · 252cca2f
  Richard A. Kirian authored Jan 27, 2012 and Thomas White committed Feb 22, 2012
  
  252cca2f
- Simplify MOSFLM peak stuff · 9fa6b17a
  Thomas White authored Jan 26, 2012 and Thomas White committed Feb 22, 2012
  
  9fa6b17a
- Correct MOSFLM coordinate convention when reading unit cell (not when writing spot file) · 21fcadcc
  Thomas White authored Jan 26, 2012 and Thomas White committed Feb 22, 2012
  
  21fcadcc
- Update copyright dates · c3c6ed56
  Thomas White authored Jan 26, 2012 and Thomas White committed Feb 22, 2012
  
  c3c6ed56
- Remove redundant sort before MOSFLM · a6694b45
  Thomas White authored Jan 26, 2012 and Thomas White committed Feb 22, 2012
  
  a6694b45
- Fix peak height going into MOSFLM, fix bug in array bounds · 5c92f43f
  Thomas White authored Jan 26, 2012 and Thomas White committed Feb 22, 2012
  
  5c92f43f
- Revert "Tidyup up of MOSFLM" · 0805d18e
  Thomas White authored Jan 26, 2012 and Thomas White committed Feb 22, 2012
```
This reverts commit bed93cd3c6fb285c66c9bbda53c24d34c975181b.
```
  0805d18e
- Tidyup up of MOSFLM · 9e4764ea
  Thomas White authored Jan 26, 2012 and Thomas White committed Feb 22, 2012
  
  9e4764ea
- Fussiness · 4a8bc2a9
  Thomas White authored Jan 26, 2012 and Thomas White committed Feb 22, 2012
  
  4a8bc2a9
- Silly bug in MOSFLM · 2b3529bf
  Thomas White authored Jan 26, 2012 and Thomas White committed Feb 22, 2012
```
This has been around for about a year...
```
  2b3529bf
- Formatting · bab3cc69
  Thomas White authored Jan 22, 2012 and Thomas White committed Feb 22, 2012
  
  bab3cc69
- More ReAx improvements · 77d007d5
  Thomas White authored Jan 22, 2012 and Thomas White committed Feb 22, 2012
  
  77d007d5
- Add a FIXME · a5ce505f
  Thomas White authored Jan 21, 2012 and Thomas White committed Feb 22, 2012
  
  a5ce505f
- Remove redundant sort, tidy up debug · c418bb57
  Thomas White authored Jan 21, 2012 and Thomas White committed Feb 22, 2012
  
  c418bb57
- Reduce minimum threshold for candidacy · 09616059
  Thomas White authored Jan 21, 2012 and Thomas White committed Feb 22, 2012
  
  09616059
- Fix broken list addition · 985418be
  Thomas White authored Jan 21, 2012 and Thomas White committed Feb 22, 2012
  
  985418be
- Keep candidate vectors in order of FoM · e2a46e38
  Thomas White authored Jan 21, 2012 and Thomas White committed Feb 22, 2012
  
  e2a46e38
- Formatting · 7d024a11
  Thomas White authored Jan 20, 2012 and Thomas White committed Feb 22, 2012
  
  7d024a11
- Formatting · 8111a94b
  Thomas White authored Jan 20, 2012
  
  8111a94b
- Fix iteration bug in fine vector search · a21ca8a1
  Thomas White authored Jan 20, 2012
  
  a21ca8a1
- Increase DirAx and MOSFLM timeouts to 30 sec · 0ae59a0d
  Thomas White authored Jan 20, 2012
  
  0ae59a0d
- Remove unused variables · 6e66a23c
  Thomas White authored Jan 20, 2012 and Thomas White committed Feb 22, 2012
  
  6e66a23c
- More uninitialised stuff · 43c6a004
  Thomas White authored Jan 20, 2012
  
  43c6a004
- Tidy up and fix stupid bugs (that Valgrind missed...) · 71aa7f6e
  Thomas White authored Jan 20, 2012
  
  71aa7f6e
- Remove deprecated SNR cutoff · ae51e754
  Thomas White authored Jan 20, 2012 and Thomas White committed Feb 22, 2012
  
  ae51e754
- Check to see if there are any reflections · a32da73c
  Thomas White authored Jan 20, 2012 and Thomas White committed Feb 22, 2012
  
  a32da73c
- Add an assertion · 63048ec4
  Thomas White authored Jan 20, 2012
  
  63048ec4
- Fix big memory leak · 725a51b8
  Thomas White authored Jan 20, 2012 and Thomas White committed Feb 22, 2012
  
  725a51b8
- Integrate in order of resolution · 429e1c3d
  Thomas White authored Jan 20, 2012 and Thomas White committed Feb 22, 2012
```
Cutoff is disabled at the moment, because the sigmas are garbage
```
  429e1c3d
- Don't forget to increment the index · b846de8d
  Thomas White authored Jan 20, 2012 and Thomas White committed Feb 22, 2012
  
  b846de8d
- Integrate via "sorted" list (sorting not implemented yet) · 4cd99469
  Thomas White authored Jan 20, 2012 and Thomas White committed Feb 22, 2012
  
  4cd99469
- Get rid of estimate_resolution() · 2ad7bdc5
  Thomas White authored Jan 20, 2012 and Thomas White committed Feb 22, 2012
```
It wasn't implemented, anyway.
```
  2ad7bdc5
- Allow "coffset" default to be set · fb190928
  Thomas White authored Jan 20, 2012 and Thomas White committed Feb 22, 2012
  
  fb190928
- Avoid freeing uninitialised stuff · 66243d21
  Thomas White authored Jan 20, 2012 and Thomas White committed Feb 22, 2012
  
  66243d21
- Don't compile or use ReAx if FFTW is not available · 4a56d62d
  Thomas White authored Jan 20, 2012 and Thomas White committed Feb 22, 2012
  
  4a56d62d
- Revert "Compile libcrystfel with -fPIC" · 2bf4d193
  Thomas White authored Jan 20, 2012 and Thomas White committed Feb 22, 2012
```
This reverts commit 7d1e8202cdd52a9df2c9599d52b69550b4d8187d.
```
  2bf4d193
- Reduce ReAx threshold to 5 sigma · 36c3440e
  Thomas White authored Jan 20, 2012 and Thomas White committed Feb 22, 2012
  
  36c3440e
- Compile libcrystfel with -fPIC · c4f05988
  Thomas White authored Jan 20, 2012 and Thomas White committed Feb 22, 2012
  
  c4f05988