Mark reflections which were not found by update_partialities()

src/geometry.c

@@ -311,9 +311,11 @@ void update_partialities(struct image *image,
 
 		if ( vals == NULL ) {
 			if ( n_notfound != NULL) (*n_notfound)++;
+			set_redundancy(refl, 0);
 			continue;
 		}
 		if ( n_found != NULL) (*n_found)++;
+		set_redundancy(refl, 1);
 
 		/* Transfer partiality stuff */
 		get_partial(vals, &r1, &r2, &p, &clamp1, &clamp2);

src/partialator.c

@@ -162,6 +162,9 @@ static int select_scalable_reflections(RefList *list, RefList *reference)
 		int sc = 1;
 		double v;
 
+		/* This means the reflection was not found on the last check */
+		if ( get_redundancy(refl) == 0 ) sc = 0;
+
 		if ( get_partiality(refl) < 0.1 ) sc = 0;
 		v = fabs(get_intensity(refl));
 		if ( v < 0.1 ) sc = 0;